Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 2076655 2076776 122 4 [0] [0] 32 flu antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

TGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGCACA  >  W3110S.gb/2076593‑2076654
                                                             |
tGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGcaca  <  1:1102155/62‑1 (MQ=255)
tGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGcaca  <  1:432057/62‑1 (MQ=255)
tGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGcaca  <  1:579852/62‑1 (MQ=255)
   gtgtGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGcaca  <  1:1338805/59‑1 (MQ=255)
                                                             |
TGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGCACA  >  W3110S.gb/2076593‑2076654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: