Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2257544	2257601	58	45 [0]	[0] 52	[rihB]	[rihB]

ATTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTG  >  W3110S.gb/2257484‑2257543                                                            | aTTATCTCTTCATGTCATATTGGGCGCCGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:338904/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:714530/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:350524/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:351973/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:379483/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:392065/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:40644/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:40907/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:49764/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:609925/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:64059/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:684991/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:340678/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:763137/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:798731/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:849907/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:85688/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:8630/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:87676/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:916997/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:927151/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:963285/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:990604/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:188081/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:1092522/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:1160519/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:1190854/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:1225309/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:126450/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:133202/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:1358129/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:1376594/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:161378/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:183751/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:345648/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:197862/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:242260/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:252578/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:253519/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:253846/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:255136/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:263258/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:295254/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:334858/1‑60 (MQ=255) aTTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTg  >  1:1024950/1‑60 (MQ=255)                                                            | ATTATCTCTTCATGTCATATTGGGCGACGGCTTTCTGCCCATCAGAAATAGCCAGGCCTG  >  W3110S.gb/2257484‑2257543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑