Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2323249	2323454	206	70 [0]	[0] 7	rcsC	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

CGCGCGAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGA  >  W3110S.gb/2323199‑2323248                                                  | cgcgcgAAGTAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:503145/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:647851/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:79810/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:748813/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:744145/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:715625/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:713115/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:693496/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:663668/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:661400/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:80647/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:645876/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:614835/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:59584/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:533960/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:530209/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:493174/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:486419/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:889965/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:995103/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:970588/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:967908/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:927306/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:924597/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:923107/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:90649/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:901134/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:458239/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:857212/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:851968/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:844635/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:837185/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:832694/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:820491/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:811664/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1159692/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1317703/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1285033/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1278508/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1261138/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1248952/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1246959/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:124324/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1214199/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1383423/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1151577/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1151211/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1142535/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1101020/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:109506/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1074106/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1048065/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1014516/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:27509/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:456577/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:426172/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:419488/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:413920/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:40300/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:371720/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:370516/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:304971/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1005808/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:172056/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1462818/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1460951/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1412523/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:1402409/50‑1 (MQ=255) cgcgcgAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:139583/50‑1 (MQ=255)         gaaACATCCTCCAGCACACAAATGGCCACGTTTTCATTACGa  <  1:20521/42‑1 (MQ=255)                                                  | CGCGCGAAGAAACATCCACCAGCACACAAATGGCCACGTTTTCATTACGA  >  W3110S.gb/2323199‑2323248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑