Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2379164	2379229	66	85 [0]	[0] 5	menE	o‑succinylbenzoate‑CoA ligase

CTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACGG  >  W3110S.gb/2379104‑2379163                                                            | cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:501752/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:674887/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:65944/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:655484/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:645459/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:627794/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:623637/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:610019/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:574214/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:57066/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:517025/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:677483/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:475260/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:473952/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:467256/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:465120/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:457981/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:454729/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:453742/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:443026/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1001833/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:840584/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:989331/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:986787/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:964803/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:95838/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:958173/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:952702/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:952516/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:942033/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:941556/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:920786/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:388581/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:816951/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:814871/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:770011/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:768746/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:755894/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:748534/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:738277/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:706866/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:690223/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1164975/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1363291/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1362663/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1346671/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1339563/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1282567/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1272414/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1262098/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1248193/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:119979/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1198794/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:136355/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1144117/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1121748/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1109467/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1081944/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1029201/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:101847/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1010403/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1009831/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1009659/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1005940/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:14217/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:368320/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:334874/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:255786/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:248213/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:200340/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:165152/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:155424/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:151066/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1471646/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:144948/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:376425/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1404444/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:139923/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1391738/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1390862/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1386626/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1384950/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:1379646/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGCGATCGCCAAACgg  >  1:584767/1‑60 (MQ=255) cTGACCGGAGACGTGAAACAGCGATAAAGAGAGCAACCAATCATCGTGATCGCCAAACgg  >  1:570806/1‑60 (MQ=255)                                                            | CTGACCGGAGACGTGAAACAGCGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACGG  >  W3110S.gb/2379104‑2379163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑