Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2476215	2476310	96	9 [0]	[0] 92	[tfaS]	[tfaS]

GACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGC  >  W3110S.gb/2476311‑2476372 |                                                              gACTGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGgcgc  <  1:356195/62‑1 (MQ=255) gACGGATACCGAGGCACAGGATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1236411/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:446783/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:577501/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:576145/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:574606/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:558829/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:558231/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:537412/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:502383/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:46194/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:455301/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:449524/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:585865/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:445356/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:399739/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:386662/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:380822/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:379618/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:374818/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:357766/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:325420/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:321767/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:319145/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:750328/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:973376/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:934620/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:916578/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:912014/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:885450/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:881699/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:862102/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:851546/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:821819/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:789140/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:314229/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:730538/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:715232/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:692607/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:682944/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:679635/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:65969/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:655949/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:638428/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:636512/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:593962/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1162785/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1328124/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1325840/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1310347/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1300037/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1297300/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1288435/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1283181/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1282374/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1242760/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1196904/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1181535/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1329646/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1127941/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1119554/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1110362/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1075339/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1066212/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1058955/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:104344/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1040642/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1018074/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1016576/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:196146/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:305233/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:303155/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:301526/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:287667/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:284171/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:279508/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:278591/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:26005/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:239956/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:230261/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:206721/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1007820/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1451201/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1437791/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1417400/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1416408/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:141043/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1406666/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1396860/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1392550/62‑1 (MQ=255) gACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:1371912/62‑1 (MQ=255) gACGGATACCAAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGc  <  1:505656/62‑1 (MQ=255) |                                                              GACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGC  >  W3110S.gb/2476311‑2476372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑