Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2507947	2508038	92	34 [0]	[0] 54	ypdD	fused predicted PTS enzymes Hpr component, enzyme I component, and enzyme IIA component

CTCATCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGC  >  W3110S.gb/2508039‑2508100 |                                                              ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATACCGGCTTTCACCGCCCAGTTCACCGc  <  1:960074/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:700980/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1005383/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:300276/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:339239/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:404220/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:460765/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:462508/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:496086/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:499215/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:503699/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:531567/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:55235/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:612457/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:688507/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:294553/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:741195/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:746455/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:81247/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:814834/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:819498/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:844392/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:895127/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:930106/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:963533/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:987109/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:987940/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1360929/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1024381/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1033488/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:108424/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1095043/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1101853/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1101966/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1131364/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1198332/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1214931/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1262878/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1265598/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1322756/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:217502/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1362490/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1374877/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1387352/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:139905/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1403113/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:141479/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1420776/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1446467/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1449452/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:1469488/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:162463/62‑1 (MQ=255) ctctTCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:188698/62‑1 (MQ=255) ctctTCCAGGCCAAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGc  <  1:777354/62‑1 (MQ=255) |                                                              CTCATCCAGGCCCAGCCCAAGCAGTAGCGGCAGATAACGGCTTTCACCGCCCAGTTCACCGC  >  W3110S.gb/2508039‑2508100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑