Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2668635	2668924	290	5 [0]	[0] 24	hcaE	3‑phenylpropionate dioxygenase, large (alpha) subunit

ACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTA  >  W3110S.gb/2668925‑2668987 |                                                               actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTAcc                          >  1:895187/1‑39 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCt                    >  1:9236/1‑45 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGAtctt         >  1:210753/1‑56 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAg    >  1:764711/1‑61 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAg    >  1:254863/1‑61 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAg    >  1:283911/1‑61 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAg    >  1:634181/1‑61 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:409712/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:756426/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:746136/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:737511/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:687371/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:651338/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:615019/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:555826/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:1080612/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:352447/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:263802/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:235935/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:189197/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:1357515/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:1162617/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGt   >  1:1156696/1‑62 (MQ=255) actaTATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCT‑GCCCGATCTTCTGAGTa  >  1:1346715/1‑62 (MQ=255) |                                                               ACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTA  >  W3110S.gb/2668925‑2668987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑