Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2688398	2688533	136	5 [0]	[0] 62	yfhK	predicted sensory kinase in two‑component system

GGGCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGC  >  W3110S.gb/2688534‑2688595 |                                                              gggCGTGCCTGTATTGATGACATCCATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1021697/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:595166/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:431652/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:444233/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:449552/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:453427/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:455145/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:467018/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:477147/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:483670/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:506444/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:507052/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:535801/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:571472/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:577322/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:586005/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:425791/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:607593/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:613163/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:666583/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:66721/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:67065/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:797333/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:799313/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:822743/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:873375/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:915168/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:951046/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:952766/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:976564/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:993702/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:995720/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1307299/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1088268/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1128017/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1138870/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1186803/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1194924/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1200111/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1208550/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1210270/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1213491/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1252621/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1262911/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1291398/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1300807/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1304355/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:407910/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1321983/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:1416950/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:170719/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:187024/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:204783/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:209703/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:26667/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:290454/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:34112/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:3578/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:382219/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:386093/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGc  <  1:393783/62‑1 (MQ=255) gggCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACAATGTAAACTGCTGCGAAGGc  <  1:201763/62‑1 (MQ=255) |                                                              GGGCGTGCCTGTATTGATGACATCAATATAAACCCGCGCACCATGTAAACTGCTGCGAAGGC  >  W3110S.gb/2688534‑2688595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑