Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2775560	2775608	49	7 [0]	[0] 48	ypjJ	hypothetical protein

CCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATC  >  W3110S.gb/2775609‑2775670 |                                                              ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCTGCAGGGATGTTCCGGATATc  <  1:1188430/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:781446/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:404026/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:465117/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:49261/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:533826/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:554516/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:557014/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:564857/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:576057/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:592686/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:623778/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:646817/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:702029/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:397093/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:823422/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:825658/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:877967/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:88970/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:893147/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:920436/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:932795/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:9625/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:970246/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:986447/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1416248/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1018462/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1027910/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1092147/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1131822/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:113681/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1197036/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:123310/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1243292/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1292711/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1327572/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1342023/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:1011532/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:146077/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:189685/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:198186/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:229157/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:230883/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:242744/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:283685/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:340524/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:376273/62‑1 (MQ=255) ccGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATc  <  1:38606/62‑1 (MQ=255) |                                                              CCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATC  >  W3110S.gb/2775609‑2775670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑