Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2945150	2945185	36	47 [0]	[0] 44	mltA	membrane‑bound lytic murein transglycosylase A

CGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAG  >  W3110S.gb/2945186‑2945247 |                                                              cGATCAGCACCTTACCAATGCTGCGTTAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:115988/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAGAAAg  <  1:593316/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:790862/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:412949/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:419876/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:449651/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:459336/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:52285/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:610382/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:684360/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:70598/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:742120/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:786742/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:408910/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:792466/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:809066/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:822318/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:827269/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:884513/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:909442/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:934941/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:937554/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:968545/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1328035/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1078046/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1089009/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1096945/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1144029/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1174632/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1178126/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1178994/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1184258/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1211169/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1226965/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1058723/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1428550/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:1445595/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:15802/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:169899/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:298586/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:313544/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:320979/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:33514/62‑1 (MQ=255) cGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAg  <  1:406622/62‑1 (MQ=255) |                                                              CGATCAGCACCTTACCAATGCTGCGATAGGCATGACCGTTTTTCCCTGCATAGCTGAAAAAG  >  W3110S.gb/2945186‑2945247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑