Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2946550	2946580	31	11 [0]	[0] 39	amiC	N‑acetylmuramoyl‑L‑alanine amidase

TAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGA  >  W3110S.gb/2946581‑2946639 |                                                           tAGTACGGCAAACCCGGGCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:28001/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:662122/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:448852/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:470323/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:487531/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:498687/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:543527/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:549660/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:58946/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:641290/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:44278/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:670725/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:674301/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:707365/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:738096/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:748997/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:790732/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:824139/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:913804/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:966073/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:193217/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:111303/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:1118580/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:1147659/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:1155106/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:1160702/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:122109/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:151494/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:185405/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:187507/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:448485/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:193453/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:270632/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:281010/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:282311/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:301804/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:316530/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:33993/59‑1 (MQ=255) tAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGa  <  1:1110728/59‑1 (MQ=255) |                                                           TAGTACGGCAAACCCGGCCTGTTCAACTTGATTTTTATGCAGCTTGTTGATTTTACCGA  >  W3110S.gb/2946581‑2946639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑