Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3143543	3144039	497	74 [0]	[0] 64	[hybA]–[hybO]	[hybA],[hybO]

TAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCG  >  W3110S.gb/3144040‑3144097 |                                                          tAGCAAGTGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1076170/1‑58 (MQ=255) tAGCAAGGGTTACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1440155/1‑58 (MQ=255) tAGCAAGGGTGCCCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:492048/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAg    >  1:1395322/1‑56 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGc   >  1:189514/1‑57 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGc   >  1:637227/1‑57 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:384583/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:563464/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:547721/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:502164/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:424920/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:394286/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:603244/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:363884/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:314645/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:306948/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:296893/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:295248/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:5638/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:247122/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:609889/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:616019/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:624653/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:640983/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:656538/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:682060/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:820897/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:851962/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:85732/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:875480/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:904951/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:916242/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:942676/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:993279/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1224531/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1009627/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1022172/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1027310/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1032603/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1033521/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1073582/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1074455/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1099028/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1113694/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1118466/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1162135/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1172751/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1175603/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:119185/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:264273/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1269306/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1290895/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1301151/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1330857/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1376587/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:138897/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1416359/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1425433/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1432097/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:1452025/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:160947/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:17893/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:100766/1‑58 (MQ=255) tAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCg  >  1:250909/1‑58 (MQ=255) |                                                          TAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATTGCAGCG  >  W3110S.gb/3144040‑3144097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑