Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3160266	3160539	274	23 [0]	[0] 63	sufI	repressor protein for FtsI

CAGGAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAT  >  W3110S.gb/3160540‑3160601 |                                                              caggAATCCCTGATCGCCAGAAATCACATGTAACGGGTGACCATCGTTCATCTGTAGTTGAt  >  1:1310904/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTc               >  1:620850/1‑49 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCAt             >  1:772589/1‑51 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGa   >  1:163685/1‑61 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:577621/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:594927/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:574728/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:569326/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:531001/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:530631/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:519785/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:471093/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:466274/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:46225/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:390622/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:385813/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:378690/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:342543/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:579048/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:291887/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:601098/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:612149/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:631751/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:663580/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:723895/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:72559/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:758267/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:827420/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:829889/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:848513/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:862616/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:935825/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1311758/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1022949/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1034757/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1083356/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1089503/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1092783/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1100325/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1113709/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1116200/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1129920/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1143532/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1182366/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1218343/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1227445/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1248892/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:304501/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1314141/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1327278/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1336898/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1351682/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1380956/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1399499/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1459374/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:166858/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:200975/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:24335/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:248545/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:284751/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:28844/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAt  >  1:1007261/1‑62 (MQ=255) caggAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACAATCGTTCATCTGTAGTTGa   >  1:682074/1‑61 (MQ=255) |                                                              CAGGAATCCCTGATCGCCAGAAATCACATGTAACGGGCGACCATCGTTCATCTGTAGTTGAT  >  W3110S.gb/3160540‑3160601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑