Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3343115	3343157	43	65 [0]	[0] 47	yrbK	conserved hypothetical protein

TAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTG  >  W3110S.gb/3343158‑3343216 |                                                           tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTGCGCAGCAAGAACGCCGAGCTGATTg  <  1:554351/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:552790/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:33516/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:389692/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:411596/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:419039/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:431380/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:463646/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:478144/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:484918/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:509823/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:510165/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:514405/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:249116/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:646593/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:652763/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:65514/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:706327/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:776105/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:84555/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:894084/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:952125/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:955391/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:973970/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1317110/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1043191/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:104660/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:10485/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1054180/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1079550/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1083498/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1085350/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1088745/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1190571/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1210262/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1312778/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:100593/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:133604/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1342356/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1359738/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:139172/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1399623/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1431383/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1448676/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:1463380/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:16216/59‑1 (MQ=255) tAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTg  <  1:164931/59‑1 (MQ=255) |                                                           TAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTG  >  W3110S.gb/3343158‑3343216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑