Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3373888	3373965	78	41 [0]	[0] 32	nanR	DNA‑binding transcriptional dual regulator

ATTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAT  >  W3110S.gb/3373966‑3374007 |                                          aTTGTTCGAAATGGGCAATCCCAGCGGGATGAGAAAGGAAAt  <  1:845099/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:2482/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:987662/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:969088/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:854847/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:833053/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:689085/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:646899/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:616332/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:395832/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:293366/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:291823/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:272576/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:268544/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:260054/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:248227/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1031040/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:238287/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:238055/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:232760/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:204410/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1399057/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1394586/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1350631/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1293393/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1239158/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1237511/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1199127/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:116524/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1148580/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1082764/42‑1 (MQ=255) aTTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAt  <  1:1078160/42‑1 (MQ=255) |                                          ATTGTTCGAAATGGGCAATCCCACCGGGATGAGAAAGGAAAT  >  W3110S.gb/3373966‑3374007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑