Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3458791	3458897	107	60 [0]	[0] 60	nusG	transcription termination factor

GCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGA  >  W3110S.gb/3458898‑3458959 |                                                              gCCTGAAGGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:32883/62‑1 (MQ=255) gCCTGAACGACGTACCATCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:782432/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCCGGCCAGTGa  <  1:297276/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:7379/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:385064/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:394895/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:4282/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:462257/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:469099/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:477888/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:510916/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:526856/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:539018/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:636113/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:651530/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:653281/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:732911/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:349750/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:741551/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:750094/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:780454/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:78462/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:815968/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:852214/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:885995/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:915455/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:960141/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:962563/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:984712/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:98714/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:989502/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1403518/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:106767/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1183685/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:119522/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1221643/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1239455/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1246112/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1246395/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1277155/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1297415/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1310698/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1317816/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1376327/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:140101/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:361437/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1406088/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1446653/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:163868/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:171659/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:225811/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:227600/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:230757/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:255950/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:305458/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:316421/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:327708/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:338462/62‑1 (MQ=255) gCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1008381/62‑1 (MQ=255) gCCTGAACGACGTACCACCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGa  <  1:1260126/62‑1 (MQ=255) |                                                              GCCTGAACGACGTACCAGCGCTTTTTAGGAGCTTCAGACATCTCAGAACCTCAGGCCAGTGA  >  W3110S.gb/3458898‑3458959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑