Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3474678	3474686	9	24 [0]	[0] 33	yijD	conserved inner membrane protein

ACGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTAA  >  W3110S.gb/3474687‑3474747 |                                                             aCGCCGAGAATAAAACCGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:884448/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTTCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:815291/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:373681/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:363633/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:380161/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:415956/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:431919/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:457530/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:615557/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:625310/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:626218/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:659562/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:769805/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:771380/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:81321/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:854565/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:883988/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1017267/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:362393/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:162136/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:159295/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1450895/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1326968/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1309955/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1178888/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1176472/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1172338/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1135069/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1113662/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1096739/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1072210/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:105827/1‑61 (MQ=255) aCGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTaa  >  1:1027530/1‑61 (MQ=255) |                                                             ACGCCGAGAATAAAACAGGCAGCTGCCAGACCCGGCAAGCCTACCGGCATAGTGCGATTAA  >  W3110S.gb/3474687‑3474747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑