Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3532563	3532586	24	15 [0]	[0] 13	cpxA	sensory histidine kinase in two‑component regulatory system with CpxR

GTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGA  >  W3110S.gb/3532587‑3532648 |                                                              gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:1081023/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:1092983/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:1108970/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:1169922/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:1341367/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:277770/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:642867/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:65890/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:669947/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:788400/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:980854/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGa  <  1:984508/62‑1 (MQ=255) gTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAAACAGTTGTGGa  <  1:1181802/62‑1 (MQ=255) |                                                              GTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGA  >  W3110S.gb/3532587‑3532648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑