Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3549325	3549420	96	40 [0]	[0] 64	yiiG	conserved hypothetical protein

TGTTGTAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGACCA  >  W3110S.gb/3549421‑3549480 |                                                            tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:70237/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:415125/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:423574/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:43965/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:443203/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:456646/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:456890/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:497779/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:509660/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:551103/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:565685/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:605416/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:613110/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:6521/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:658019/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:699739/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:412015/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:713834/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:720071/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:723010/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:753119/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:755381/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:814869/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:829078/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:846662/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:857200/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:860913/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:887199/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:917652/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:937993/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:975532/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:982848/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1361169/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1026515/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1027239/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1048154/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1066976/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:108047/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1103158/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1200742/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1210915/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1260661/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1290742/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1299878/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1301364/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1302760/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1340564/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:223119/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:406357/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:400127/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:394526/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:367355/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:365754/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:310891/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:300292/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1369573/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:197004/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:191207/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1418244/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1417363/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1417337/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGacca  <  1:1389052/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCAACGacca  <  1:1207147/60‑1 (MQ=255) tgttgtAGCACTTGATATAGACATCCATTTTTTCGGCGAAAACCGCTTGTTCATCGacca  <  1:1022845/60‑1 (MQ=255) |                                                            TGTTGTAGCACTTGATATAGACATCCATTTTTTCGTCGAAAACCGCTTGTTCATCGACCA  >  W3110S.gb/3549421‑3549480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑