Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3718326	3718347	22	29 [0]	[0] 46	atpA	F1 sector of membrane‑bound ATP synthase, alpha subunit

AAGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTGAG  >  W3110S.gb/3718348‑3718408 |                                                             aaGCAACCCAATCCTGGTATCGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:375610/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:705923/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:248856/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:278960/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:33431/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:353794/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:389373/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:613390/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:627357/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:635648/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:681711/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:695645/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:23200/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:734083/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:74109/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:790651/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:794035/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:798133/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:866576/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:869491/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:926051/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:92874/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:972010/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1240506/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1013247/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1023380/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1023734/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1055862/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1057838/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1094036/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1155129/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1169616/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1200002/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1211873/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1222700/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1010610/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1251602/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1252296/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1253316/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1283617/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1342870/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:143798/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1465177/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:1468403/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:173527/61‑1 (MQ=255) aaGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTgag  <  1:195998/61‑1 (MQ=255) |                                                             AAGCAACCCAATCCTGGTAACGTCTGGCGGCTTGCCTTAGGGCAGGCCGCAAGGCATTGAG  >  W3110S.gb/3718348‑3718408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑