Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3803154	3803165	12	48 [0]	[0] 100	setC	predicted sugar efflux system

CACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTAATTT  >  W3110S.gb/3803166‑3803224 |                                                           cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:234304/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1374115/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:641311/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:622746/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:607789/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:601137/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:596825/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:157341/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:587416/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:185073/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:577262/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:659150/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:522206/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:511262/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:300870/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:47580/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:455848/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:450179/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:352618/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:445064/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:358426/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:663852/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1027062/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:989048/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:974466/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1062838/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1108127/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1139114/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:968852/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:953525/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:925585/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:875171/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:825885/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:804264/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1257454/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1263211/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1264887/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:745983/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:705384/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:680161/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATaa                          >  1:1339842/1‑35 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGGAGAATCAGTa      >  1:525774/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATGAGTa      >  1:473904/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGt       >  1:606222/1‑54 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGt       >  1:1196832/1‑54 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:868159/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1369426/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1350719/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:677643/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1334491/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:686573/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1322858/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:734530/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1266840/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:771840/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:787229/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1250298/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:806830/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:645506/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1178816/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:898796/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:903705/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1157629/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:943647/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1152098/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:958049/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1151129/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:973888/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:104796/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:976136/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1042514/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:992311/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:21019/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:393772/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:397418/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:415276/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:353029/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:333644/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:309321/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1021735/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:306755/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:479966/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:482516/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:487415/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:288639/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:275780/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:656435/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:530587/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:540579/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:18623/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:579357/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:184318/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:157330/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1441886/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:61836/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1412392/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:633629/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:1396829/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTa      >  1:38005/1‑55 (MQ=255) cACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTAAtta  >  1:1421796/1‑58 (MQ=255) |                                                           CACGCAAAAAGCGTGCAGGCCAGCACTCCAAATAAGCAACATAGCAGAATCAGTAATTT  >  W3110S.gb/3803166‑3803224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑