Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3817305	3817341	37	39 [0]	[0] 54	spoT	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase

CCTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCCGCGC  >  W3110S.gb/3817342‑3817403 |                                                              ccTGCAAACGCGCTTCGATTTCAGAAAGAATCTTCTg                           >  1:595528/1‑37 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGatca                      >  1:458126/1‑42 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCttt               >  1:421451/1‑49 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCtt                >  1:1042002/1‑48 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGt          >  1:1179418/1‑54 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGt          >  1:1423425/1‑54 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGc       >  1:1424036/1‑57 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGc       >  1:1352986/1‑57 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGc       >  1:1130444/1‑57 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGc       >  1:1185910/1‑57 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:635561/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:99573/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:431495/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:96810/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:463414/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:489454/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:505034/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:585498/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:634862/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:838230/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:637298/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:694964/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:697153/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:3443/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:947464/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:701188/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:733031/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:932239/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:778966/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:798304/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:344954/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:1096289/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:1135072/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:119740/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:1373385/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:1384292/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:1427679/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:1427935/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:1438066/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:175902/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:20324/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:226090/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:301820/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:31743/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcgc  >  1:38019/1‑62 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcg   >  1:1431536/1‑61 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcg   >  1:653351/1‑61 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcg   >  1:670809/1‑61 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcg   >  1:210230/1‑61 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcg   >  1:1308980/1‑61 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgcg   >  1:1233637/1‑61 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgc    >  1:1310226/1‑60 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCcgc    >  1:1187921/1‑60 (MQ=255) ccTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGCATCATCTCTTTACGGTTGCcgcgc  >  1:31567/1‑62 (MQ=255) |                                                              CCTGCAAACGCCCTTCGATTTCAGAAAGAATCTTCTGGATCATCTCTTTACGGTTGCCGCGC  >  W3110S.gb/3817342‑3817403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑