Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3860493	3860954	462	19 [0]	[0] 40	[lldD]–[lldR]	[lldD],[lldR]

TTAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGGCGCG  >  W3110S.gb/3860955‑3861009 |                                                       ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:765557/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1031450/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:494060/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:508751/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:510140/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:53/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:664021/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:670145/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:713207/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:72973/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:473329/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:805949/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:885350/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:891317/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:920267/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:950491/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:952300/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:98273/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:998186/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:998260/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1428772/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1165972/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1181104/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1219412/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1243360/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1264416/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:132453/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1328853/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1335031/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:431971/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:1431825/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:198850/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:28245/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:316854/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:316909/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:380096/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgcg  >  1:382038/1‑55 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgc   >  1:855069/1‑54 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgc   >  1:1438259/1‑54 (MQ=255) ttAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGgcgc   >  1:275063/1‑54 (MQ=255) |                                                       TTAGCGTTGCTTCAAAGCAAAGCTGAATCTTTTCTTTGTCGCCAGGTGTGGCGCG  >  W3110S.gb/3860955‑3861009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑