Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3969621	3969686	66	5 [0]	[0] 8	treF	cytoplasmic trehalase

TGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT  >  W3110S.gb/3969687‑3969748 |                                                              tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAgcg                        >  1:330297/1‑40 (MQ=255) tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGgcgc   >  1:1346254/1‑61 (MQ=255) tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGct  >  1:1031731/1‑62 (MQ=255) tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGct  >  1:1345595/1‑62 (MQ=255) tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGct  >  1:561134/1‑62 (MQ=255) tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGct  >  1:63650/1‑62 (MQ=255) tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGct  >  1:782476/1‑62 (MQ=255) tGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGct  >  1:976098/1‑62 (MQ=255) |                                                              TGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT  >  W3110S.gb/3969687‑3969748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑