Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4010086	4010289	204	32 [0]	[0] 46	yhiI	predicted HlyD family secretion protein

CCGCTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCG  >  W3110S.gb/4010290‑4010351 |                                                              ccgcTGAGCGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCgg             >  1:1089047/1‑51 (MQ=255) ccgcTGAGAGCTCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAg    >  1:478502/1‑60 (MQ=255) ccgcTGAGAGCGCCCGCGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGc   >  1:158742/1‑61 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGATAGCTCAGGTATCGGCTTCTAAAGCg  >  1:463483/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAg    >  1:655753/1‑60 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGca  >  1:709233/1‑61 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGc   >  1:1089064/1‑61 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGc   >  1:1135590/1‑61 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGc   >  1:1451403/1‑61 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:716314/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:364761/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:437633/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:457866/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:547254/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:593821/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:714796/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:290712/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:729136/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:729502/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:732245/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:786247/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:825139/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:860269/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:947995/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:999043/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1309884/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:104363/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1044299/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1087207/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1105328/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1113794/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1160909/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1179057/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1201696/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1278736/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:342529/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1311228/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1446739/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:146527/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:187366/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:189120/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:21061/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:1019895/1‑62 (MQ=255) ccgcTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:317849/1‑62 (MQ=255) ccgcTGAGAGCGCCAGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCg  >  1:637446/1‑62 (MQ=255) ccgcTGAGAGCGCACGAGCTGCGCTGGAATCGGCGAAAGCTCa                     >  1:1061187/1‑43 (MQ=255) |                                                              CCGCTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCG  >  W3110S.gb/4010290‑4010351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑