Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4081650	4081671	22	47 [0]	[0] 47	rtcR	sigma 54‑dependent transcriptional regulator of rtcBA expression

TCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTG  >  W3110S.gb/4081672‑4081732 |                                                             tCGAGGTCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGGGCTTTTTTGCGCGGAGGTg  <  1:609732/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAgggg  <  1:339079/61‑3 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:653592/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:356230/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:44157/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:459089/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:464788/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:535268/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:566438/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:601600/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:605670/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:606561/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:992513/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:705093/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:727192/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:732463/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:745168/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:789835/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:808213/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:829258/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:872107/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:876686/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:942705/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1040858/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1419378/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1117951/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1141901/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1142531/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1224715/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1255562/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1301137/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1334358/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:134072/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1348402/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1349435/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1379436/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:354459/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1427795/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:1436105/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:163548/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:187481/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:205950/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:22666/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:229394/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:240322/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:260190/61‑1 (MQ=255) tCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTg  <  1:26816/61‑1 (MQ=255) |                                                             TCGAGATCGATAATCGTTACTTCACCTGGGCCGCGCGGCTGTTCTTTTTTGCGCGGAGGTG  >  W3110S.gb/4081672‑4081732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑