Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	11175	11241	67	13 [0]	[2] 54	yaaW htgA	conserved hypothetical protein hypothetical protein

CAGTACGCTGGAGAGGCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTCC  >  W3110S.gb/11228‑11300               |                                                           cAGTACGCTGGAGAGGCGAGTTTTGCCTTTTTCATTATGGGTg                                >  1:1044267/1‑43 (MQ=255) cAGTACGCTGGAGAGGCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAAttt              >  1:55552/1‑61 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGATCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1236600/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCTAAATTTGCCAACTGTTcc  <  1:991668/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTct  <  1:127444/59‑2 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:787336/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:418542/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:47920/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:511222/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:533616/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:551168/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:624191/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:662357/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:665947/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:681352/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:73366/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:754164/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:757519/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:397133/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:801569/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:8068/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:818240/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:837697/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:880323/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:889330/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:916565/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:963802/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:979256/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:995735/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1295206/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1080863/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:111061/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1163238/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1179454/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:118382/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1211463/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1230437/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1233660/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1238347/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1240584/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1250830/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1286906/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:39975/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1345982/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1372924/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1427662/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1460183/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:188112/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:267691/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:322843/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:360543/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:367889/59‑1 (MQ=255)               ggCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:391194/59‑1 (MQ=255)               ggCGAGTTTTGACTTTTTCATTCTGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTcc  <  1:1304468/59‑1 (MQ=255)               |                                                           CAGTACGCTGGAGAGGCGAGTTTTGCCTTTTTCATTATGGGTGAGCAATCGGGCGAAATTTGCCAACTGTTCC  >  W3110S.gb/11228‑11300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑