Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	11441	11542	102	54 [0]	[0] 56	yaaI	hypothetical protein

TCTGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCA  >  W3110S.gb/11543‑11604 |                                                              tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCg                    >  1:1431720/1‑44 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATc      >  1:893668/1‑58 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGcc   >  1:38154/1‑61 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGcc   >  1:1221258/1‑61 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:732047/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:413689/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:428075/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:428886/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:429800/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:437427/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:583446/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:584345/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:6089/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:629502/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:680968/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:72266/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:729036/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:397567/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:742586/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:752195/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:767087/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:775587/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:813760/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:815850/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:850411/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:883239/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:936530/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:951826/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:982891/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:992598/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1287723/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:102919/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1031661/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1033037/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1052334/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1109155/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1166673/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1178724/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1179929/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1183527/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1218036/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1237437/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1257412/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:400780/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1312940/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1362174/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1373992/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1415172/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1417507/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:193073/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:19508/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:196223/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:2230/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:315688/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:342648/1‑62 (MQ=255) tctGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCa  >  1:1016562/1‑62 (MQ=255) |                                                              TCTGACTGGCGCTACGGGCGGCTTTGAAATAAACCGATGCACCGCTTAACTGTAAATCGCCA  >  W3110S.gb/11543‑11604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑