Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4186315	4186436	122	4 [3]	[0] 46	gspA	general secretory pathway component, cryptic

TATATCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTG  >  W3110S.gb/4186437‑4186497 |                                                             tataTCGTGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1363989/61‑1 (MQ=255) tataTCGGTATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1150784/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:746841/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:325034/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:355631/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:429348/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:449207/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:459200/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:51899/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:538853/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:541563/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:699753/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:713701/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:735034/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:320419/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:748530/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:795024/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:815037/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:82945/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:876227/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:87677/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:882809/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:922089/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:994094/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1417300/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1132189/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1168429/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1173310/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1190251/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1225745/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1322280/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1359099/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1412393/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1413101/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:322080/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1418972/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1429089/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1450039/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:156951/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:16326/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:218179/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:236656/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:245252/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:280523/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTg  <  1:1070593/61‑1 (MQ=255) tataTCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACACGTTTg  <  1:1327598/61‑1 (MQ=255) |                                                             TATATCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGACATGTTTG  >  W3110S.gb/4186437‑4186497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑