Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4359760	4359863	104	70 [0]	[0] 85	yjdL	predicted transporter

CGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAAG  >  W3110S.gb/4359864‑4359925 |                                                              cGGTTAATCCGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCAc               >  1:506497/1‑49 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTTATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1182697/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCAcc              >  1:862480/1‑50 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCgg            >  1:82870/1‑52 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTc         >  1:92039/1‑55 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATaaa   >  1:1371780/1‑61 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:69288/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:75890/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:690113/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:689139/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:651998/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:648560/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:624076/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:62242/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:618045/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:615720/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:60664/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:582477/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:565475/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:546781/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:546609/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:546299/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:523772/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:522893/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:838977/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:937802/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:930362/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:924806/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:921700/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:911450/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:896417/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:878929/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:872752/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:851216/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:708533/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:8153/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:814104/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:780879/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:780814/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:760406/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:487153/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:751985/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:721021/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1273508/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:492537/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1428225/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:138872/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1361971/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1327568/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:130866/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1301956/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1293802/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1287768/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:128055/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1435524/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:123598/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1188305/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1182770/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1175879/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1130748/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:111989/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1108511/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:105433/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:101798/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1457936/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1012638/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:447576/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:445624/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:435524/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:432058/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:425311/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:418244/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:40517/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:390923/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:322343/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:317450/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:315128/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:292216/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:2425/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:226696/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:189940/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:168730/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:1442466/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAAGAAag  >  1:923234/1‑62 (MQ=255) cGGTTAATACGCCAGACATTTTCAGACGCGAGATTTGCGCAATCGCCACCGGGTCAATAAag  >  1:341128/1‑62 (MQ=255) |                                                              CGGTTAATACGCCAGACATTTTCAGACGCGTGATTTGCGCAATCGCCACCGGGTCAATAAAG  >  W3110S.gb/4359864‑4359925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑