Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4408576	4408744	169	64 [0]	[0] 46	hflC	modulator for HflB protease specific for phage lambda cII repressor

ATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTC  >  W3110S.gb/4408745‑4408780 |                                    aTGAAGTGACCAGAACTCTGGCAGAAGCTGAGCGTc  >  1:1219339/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:576717/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:334148/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:363358/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:374032/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:414556/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:419514/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:421855/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:425243/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:442234/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:442505/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:510265/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:569999/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:331476/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:593159/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:610395/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:720787/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:766694/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:783239/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:802652/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:835421/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:865185/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:888140/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:950033/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1380276/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1012938/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1022327/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1024127/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1089862/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1104333/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1143416/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1150572/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1157196/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1221636/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1268627/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1001544/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:1392078/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:152370/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:166553/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:167841/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:21218/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:232519/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:257236/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:258606/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:260316/1‑36 (MQ=255) aTGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTc  >  1:265154/1‑36 (MQ=255) |                                    ATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTC  >  W3110S.gb/4408745‑4408780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑