Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	54423	54521	99	33 [0]	[0] 43	surA	peptidyl‑prolyl cis‑trans isomerase

GAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCG  >  W3110S.gb/54522‑54583 |                                                              gAAGTTGCTGCCTTGCGTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1269700/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGTATTAATCCATCAACGTCg  >  1:811772/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCAtt                 >  1:262700/1‑47 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:629838/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:359063/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:408369/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:415896/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:468061/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:480559/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:521577/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:54725/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:548233/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:565248/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:327229/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:682938/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:684904/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:70244/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:731506/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:746553/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:768053/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:924641/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:991227/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1296925/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1072204/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1097464/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:115191/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1154818/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1161162/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1174982/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1186649/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1230139/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1246645/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:338048/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:131943/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1404989/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1405731/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1415967/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1446801/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:205076/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:22/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:2628/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCg  >  1:1060232/1‑62 (MQ=255) gAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACAGCATTAATCCATCAACGTCg  >  1:665199/1‑62 (MQ=255) |                                                              GAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCATCAACGTCG  >  W3110S.gb/54522‑54583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑