Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	61906	62196	291	44 [0]	[0] 56	hepA	RNA polymerase‑associated helicase protein

GCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTG  >  W3110S.gb/62195‑62256   |                                                            agaaCTGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:866302/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCGAAATCGTg  <  1:492591/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:516748/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:281700/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:303222/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:343022/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:349854/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:363407/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:37704/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:39164/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:412317/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:432159/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:443534/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:490177/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:499864/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1028863/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:517319/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:531234/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:589196/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:591746/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:611872/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:644497/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:732443/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:761787/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:898392/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:942712/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:966133/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:26408/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:102184/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1045380/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1053229/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1055071/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1059778/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1122687/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1125155/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1273450/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1283362/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1293005/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1320484/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1322158/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1326373/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1340855/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1364523/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1378167/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1393510/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:1415550/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:155411/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:187684/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:205930/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:2095/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:212770/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:258005/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:260639/60‑1 (MQ=255) agaaCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:272377/60‑1 (MQ=255) agaaCGGCGTCAGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:804194/60‑1 (MQ=255) agaaCGGCGTACGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg  <  1:969314/60‑1 (MQ=255)   |                                                            GCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTG  >  W3110S.gb/62195‑62256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑