Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	411025	411038	14	84 [0]	[0] 69	araJ	predicted transporter

TTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAC  >  W3110S.gb/411039‑411100 |                                                              ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATc                    >  1:1392591/1‑44 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTggcgg             >  1:414540/1‑51 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTaa   >  1:878528/1‑61 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTaa   >  1:1165234/1‑61 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTaa   >  1:826578/1‑61 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTaa   >  1:387960/1‑61 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:512152/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:550672/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:508037/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:504259/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:503276/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:487870/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:465667/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:418064/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:365678/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:358523/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:34158/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:335868/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:316915/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:303550/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:520189/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:255458/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:554251/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:594035/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:607902/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:621686/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:657107/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:694746/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:701940/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:767737/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:792534/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:841057/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:850953/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:884097/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:9127/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:913016/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1362945/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:10225/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1105384/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:111117/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1158040/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1159811/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:120318/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1237779/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:123983/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1253518/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1275541/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1292662/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1295511/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1304294/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1325890/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1344926/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1446256/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1020116/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:174127/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:161633/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:148507/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1461926/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1457327/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1447466/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:255841/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1435863/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1425903/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1425045/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1419715/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1406739/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1382843/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1372356/1‑62 (MQ=255) ttACGTAGCTGAACCAGGCAAACACACCTGCGCTGCCAAACATCGTGGCGGCGAAAATTAAc  >  1:1206439/1‑62 (MQ=255) |                                                              TTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAC  >  W3110S.gb/411039‑411100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑