Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	417539	417799	261	5 [1]	[0] 18	phoR	sensory histidine kinase in two‑component regulatory system with PhoB

AATGAGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAT  >  W3110S.gb/417800‑417849 |                                                  aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:55137/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:968436/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:748048/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:727592/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:717518/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:606467/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:601772/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:601745/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:561076/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:1030228/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:414315/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:383857/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:353544/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:276384/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:198689/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:17386/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:1410441/50‑1 (MQ=255) aatgaGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAt  <  1:1056418/50‑1 (MQ=255) |                                                  AATGAGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCAT  >  W3110S.gb/417800‑417849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑