Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	503816	503904	89	7 [0]	[0] 97	fsr	predicted fosmidomycin efflux system

GTTCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTAAA  >  W3110S.gb/503905‑503953 |                                                 gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGTTGTaaa  >  1:644600/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:580856/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:782637/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:778612/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:777847/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:763582/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:762565/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:747088/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:70271/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:662107/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:635901/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:597310/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:785622/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:562650/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:558291/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:542885/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:537957/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:523293/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:475224/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:433229/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:409426/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:398643/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1007014/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:381759/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:897985/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:990287/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:990022/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:985701/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:940078/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:926540/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:923465/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:92257/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:919575/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:91911/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:91709/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:911696/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:389487/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:897534/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:876676/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:872120/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:867106/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:852447/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:837564/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:823367/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:823280/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:807471/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:789551/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1253121/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1349935/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:377656/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1300693/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1283259/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1279472/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1278375/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:127648/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1270835/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:126330/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:125683/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1256008/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1335426/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1251650/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1220340/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1202695/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1198483/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:119381/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1180585/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1150467/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:11478/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1089336/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1076378/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1060688/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:178244/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:370798/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:34134/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:298324/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:266300/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:250464/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:245636/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:224032/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:208229/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:185527/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:183314/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1372584/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:177439/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:164020/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:161629/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:150238/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1458374/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1448812/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:1405795/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:138913/1‑49 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaa   >  1:539995/1‑48 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaa   >  1:1272875/1‑48 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaa   >  1:766441/1‑48 (MQ=255) gttCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTACGATGTaaa  >  1:88146/1‑49 (MQ=255) gttCACTAATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa  >  1:206453/1‑49 (MQ=255) gttCACTAATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaa   >  1:877129/1‑48 (MQ=255) |                                                 GTTCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTAAA  >  W3110S.gb/503905‑503953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑