Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	513384	513691	308	43 [0]	[0] 55	[cueR]–[ybbJ]	[cueR],[ybbJ]

GCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACCGCG  >  W3110S.gb/513692‑513753 |                                                              gCACCGAGATCCTCGTTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:79685/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCTTGAACTGTCACCGACGCGCATATGACcgcg  >  1:704276/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCa                      >  1:1135195/1‑42 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:696745/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:404684/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:416542/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:500600/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:501901/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:50402/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:561724/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:56259/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:568906/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:594129/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:626832/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:648800/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:667418/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:678082/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:374354/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:822819/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:864830/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:890048/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:900876/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:916996/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:93614/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:960935/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:976540/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:988396/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:994879/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1409708/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1092217/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1111455/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1127322/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1175212/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1252859/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1303007/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1315484/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1334577/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1362827/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1366874/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1400990/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1438706/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1445649/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:1461206/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:16356/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:239192/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:24247/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:278252/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:303118/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:317329/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:32261/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:343224/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgcg  >  1:364743/1‑62 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgc   >  1:1050275/1‑61 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgc   >  1:712855/1‑61 (MQ=255) gCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACcgc   >  1:1113624/1‑61 (MQ=255) |                                                              GCACCGAGATCCTCGCTGGCGCTGACAGGCCATGAACTGTCACCGACGCGCATATGACCGCG  >  W3110S.gb/513692‑513753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑