Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	558240	558814	575	6 [0]	[0] 7	sfmC	pilin chaperone, periplasmic

CAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGT  >  W3110S.gb/558815‑558876 |                                                              cAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGt  <  1:1134427/62‑1 (MQ=255) cAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGt  <  1:1208613/62‑1 (MQ=255) cAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGt  <  1:1415950/62‑1 (MQ=255) cAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGt  <  1:367760/62‑1 (MQ=255) cAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGt  <  1:615863/62‑1 (MQ=255) cAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGt  <  1:658367/62‑1 (MQ=255) cAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGt  <  1:731349/62‑1 (MQ=255) |                                                              CAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGT  >  W3110S.gb/558815‑558876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑