Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	580647	580676	30	25 [0]	[0] 40	nohB/tfaD	DNA packaging protein/DLP12 prophage region; ECK0553:JW5815:b0561; predicted tail fiber assembly protein

CGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTG  >  W3110S.gb/580677‑580738 |                                                              cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAacac    >  1:193050/1‑60 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACt   >  1:572530/1‑61 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACt   >  1:803762/1‑61 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACt   >  1:1348665/1‑61 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:687442/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:301911/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:490664/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:530355/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:565794/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:603695/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:669666/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:677715/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:296473/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:728243/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:796349/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:848795/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:866406/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:881172/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:911957/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:920393/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:923939/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:119772/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1017816/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:106432/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1071871/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1091389/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1098183/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1118651/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1155951/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1013097/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1201563/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1311452/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:1422096/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:15930/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:192014/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:192884/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:220616/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTg  >  1:277875/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGCAAGGGCGCTGGGAAACACTg  >  1:105270/1‑62 (MQ=255) cGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACAAGGAAGGGCGCTGGGAAACACTg  >  1:86335/1‑62 (MQ=255) |                                                              CGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTG  >  W3110S.gb/580677‑580738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑