Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	599463	600047	585	8 [0]	[1] 55	cusA	copper/silver efflux system, membrane component

ATATCGACGCGATGGCTGAGCAAATTGAAGAAGTAGCGCGAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCA  >  W3110S.gb/600011‑600109                                      |                                                              atatCGACGCGATGGCTGAGCAAATTGAAGAAGTAGCGCGAACGGTGCCAGGCGTAGCTTCt                                       >  1:1435352/1‑62 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:676760/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:367937/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:372933/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:485888/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:505534/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:527357/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:553939/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:606713/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:609414/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:615070/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:633795/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:651864/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:668096/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:273997/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:677086/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:691449/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:731036/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:732946/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:762235/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:767936/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:790405/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:869866/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:879717/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:883480/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:90738/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:920325/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:938479/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1030611/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1031477/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1053620/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1067126/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1087352/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:112457/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:115116/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1161601/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1174053/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1183027/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1286639/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:131280/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1321076/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1322119/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1340727/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1365323/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1368906/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1394863/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1422729/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:144545/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1448299/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:196117/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:233773/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:253531/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:260781/62‑1 (MQ=255)                                      gcgAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:356323/62‑1 (MQ=255)                                      gcgAACGGTGCAAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCa  <  1:1322397/62‑1 (MQ=255)                                      |                                                              ATATCGACGCGATGGCTGAGCAAATTGAAGAAGTAGCGCGAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCA  >  W3110S.gb/600011‑600109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑