Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	998152	998239	88	20 [0]	[0] 69	ssuE/ycbQ	NAD(P)H‑dependent FMN reductase/predicted fimbrial‑like adhesin protein

ATGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGAAA  >  W3110S.gb/998240‑998295 |                                                        aTGTCATTTAAAGTCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:925669/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:420200/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:653585/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:649768/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:609599/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:591971/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:575847/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:573116/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:518481/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:422033/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:739907/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:411093/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:405139/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:328439/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:320409/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:313865/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:257194/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:201787/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:873766/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:9892/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:962586/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:961503/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:952413/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:948619/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:947580/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:935372/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:915379/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:705352/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:866283/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:852366/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:846389/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:828798/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:814131/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:809177/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:162024/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1142338/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1237041/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1227141/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1202658/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1200635/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1197781/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1190613/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:11738/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1154142/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1251716/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1130228/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1129046/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1122330/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1092480/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1066314/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1042173/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1021797/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1390616/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1470224/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1464032/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1452823/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1452685/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1447841/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1407716/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1405727/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1392506/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1005986/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1347560/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1310184/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1281955/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1279151/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1278529/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:12676/56‑1 (MQ=255) aTGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGaaa  <  1:1252876/56‑1 (MQ=255) |                                                        ATGTCATTTAAAGGCATTATCATATTTACGAAGAGATCAGGATGATAACGATGAAA  >  W3110S.gb/998240‑998295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑