Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1139733	1139874	142	85 [0]	[0] 28	flgJ	muramidase

GATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGC  >  W3110S.gb/1139875‑1139912 |                                      gATAATCTTTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:295762/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:39734/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:892763/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:866025/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:854927/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:718538/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:717354/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:682937/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:627422/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:626713/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:576106/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:494713/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:492002/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:456292/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:441747/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1004250/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:391367/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:35249/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:305365/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:283443/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1424166/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1423992/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1390336/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1251491/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1111437/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1069369/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc  <  1:1018186/38‑1 (MQ=255) gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTAGc  <  1:1137437/38‑1 (MQ=255) |                                      GATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGC  >  W3110S.gb/1139875‑1139912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑