Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1463274	1463555	282	5 [0]	[0] 38	paaJ	predicted beta‑ketoadipyl CoA thiolase

TGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTG  >  W3110S.gb/1463556‑1463617 |                                                              tGGACGTGATTGAAGTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAAtt   >  1:685174/1‑61 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGccc                            >  1:1028513/1‑36 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAg                          >  1:1322658/1‑38 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:298290/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1059216/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:326691/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:34084/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:394351/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:438669/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:506707/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:508039/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:533354/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:631886/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:681864/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:722814/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:843292/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:849254/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:912925/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:936985/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:95007/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:137081/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1073989/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1177416/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1185106/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:123442/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1258578/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1296460/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:131738/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1358679/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1388449/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:138955/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:1463666/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:155538/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:167813/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:199548/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:219093/1‑62 (MQ=255) tGGACGTGATTGAACTGAACGAAGCGTACGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:288366/1‑62 (MQ=255) tGGACGTGATTGAACTGAAAGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTg  >  1:526643/1‑62 (MQ=255) |                                                              TGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTG  >  W3110S.gb/1463556‑1463617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑