Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1589292	1589367	76	42 [0]	[0] 77	ydeQ	predicted fimbrial‑like adhesin protein

ACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACA  >  W3110S.gb/1589368‑1589420 |                                                     aCAACTGAAGGCTAAAACTTTGCCTGCCATTAATa                    <  1:1135507/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:439566/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1394929/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1395238/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:141707/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:841209/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:454920/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1454432/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:61467/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:157494/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:870569/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:180866/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:777306/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:435972/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:234194/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:267409/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:320473/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:740693/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:901252/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:464937/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:124107/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:36051/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:949258/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:951787/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1136776/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1113827/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1102672/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:490443/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1098885/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:1080331/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATa                    <  1:508732/35‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATATAAGATAAATACCGAACa  <  1:1236512/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGATGATAAATACCGAACa  <  1:869431/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:800579/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:680157/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:602364/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:592756/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:576553/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:544250/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:682354/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:729668/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:738468/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:776194/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:78311/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:377932/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:828500/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:921199/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:923128/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:954469/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:980470/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:985483/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:154421/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:102499/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1026534/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1101961/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1140896/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1172482/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1230216/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1257158/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1352666/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1369496/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1377588/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1429758/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:144388/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:518740/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:180771/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:184167/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:221241/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:340235/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:34232/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:352177/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:1020260/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:379910/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:391752/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:437641/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:45261/53‑1 (MQ=255) aCAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACa  <  1:487568/53‑1 (MQ=255) |                                                     ACAACTGAAGGCAAAAACTTTGCCTGCCATTAATAGAAGATAAATACCGAACA  >  W3110S.gb/1589368‑1589420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑