Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1965294	1965613	320	35 [0]	[0] 11	flhA	predicted flagellar export pore protein

AACAACTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTCC  >  W3110S.gb/1965614‑1965675 |                                                              aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:1084415/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:1086197/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:109396/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:1406627/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:36273/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:415762/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:727461/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:791176/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:81173/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:967957/62‑1 (MQ=255) aacaacTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTcc  <  1:973802/62‑1 (MQ=255) |                                                              AACAACTCACCATCCTGCTGGAAATCGACCATCGGGATCAGTCGATAACCCACTTCCATTCC  >  W3110S.gb/1965614‑1965675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑