Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1967346	1967439	94	14 [0]	[0] 42	flhB	predicted flagellar export pore protein

CAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATC  >  W3110S.gb/1967440‑1967501 |                                                              cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCTCGCCAGTCTGAGCCGAGAACATc  >  1:322029/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAg             >  1:231793/1‑51 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACa    >  1:1431626/1‑60 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACAt   >  1:197272/1‑61 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACAt   >  1:78795/1‑61 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:762131/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:345372/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:411317/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:421101/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:454190/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:50229/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:646388/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:693075/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:326203/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:768539/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:815290/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:839274/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:884010/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:893374/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:928638/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:934426/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:945359/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:959293/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1287152/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1051864/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1053309/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1079366/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1130112/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1139443/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1149862/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1197842/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1207837/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1216493/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:332015/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1301500/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1303328/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1329558/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1358430/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:1371033/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:315496/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATc  >  1:103239/1‑62 (MQ=255) cAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCCCGCCAGTCTGAGCCGAGAACATc  >  1:498860/1‑62 (MQ=255) |                                                              CAACCAGGATGGTTTTCAAAATTGCTTTAAGCAACTCCGCGCCAGTCTGAGCCGAGAACATC  >  W3110S.gb/1967440‑1967501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑