Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2007966	2008218	253	55 [0]	[0] 12	[fliT]	[fliT]

TGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGAA  >  W3110S.gb/2008219‑2008280 |                                                              tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1116968/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1150503/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1151232/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1173307/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1247353/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1280555/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1307866/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:1389185/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:380045/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:634330/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGaa  >  1:790509/1‑62 (MQ=255) tGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAAGGTTCCCCTTGaa  >  1:1336687/1‑62 (MQ=255) |                                                              TGAATGAGTCGATGGCTCGCGAATAATCCGATTACGGCTACGCTTCTAATGTTCCCCTTGAA  >  W3110S.gb/2008219‑2008280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑