Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2016032	2016441	410	4 [3]	[0] 40	fliF	flagellar basal‑body MS‑ring and collar protein

AGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTCG  >  W3110S.gb/2016442‑2016503 |                                                              aGTCGATCGCACCTTTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:82208/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGc                 >  1:940772/1‑47 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTg         >  1:976864/1‑55 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:734551/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1028588/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:331584/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:34582/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  <  1:3484/62‑1 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:363631/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:369350/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:42251/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:438288/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  <  1:493915/62‑1 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:315436/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:771264/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:812014/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:921351/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:980324/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:989956/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:991586/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:140607/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:10711/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1171472/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1213833/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1218869/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1287921/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1295606/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  <  1:130787/62‑1 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1358058/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:30938/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1427461/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1441720/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1442195/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:1447868/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:195137/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:222313/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:222675/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:303425/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTcg  >  1:309327/1‑62 (MQ=255) aGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGGCTGTCAGTcg  >  1:929761/1‑62 (MQ=255) |                                                              AGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTCG  >  W3110S.gb/2016442‑2016503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑