Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 2073491 2073553 63 7 [0] [0] 5 yeeP/flu CP4‑44 prophage region; ECK1991:JW5327:b1999; predicted GTP‑binding protein/antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

CAACAGAACCACAATTCAGAAACTCCCACAGCCGGACCTCCGGCACTGTAACCCTTTACCTG  >  W3110S.gb/2073554‑2073615
|                                                             
caacaGAACCACAATTCAGAAACTCCCACAGCCGGACCTCCGGCACTGTAACCCTTTACCTg  >  1:1153655/1‑62 (MQ=255)
caacaGAACCACAATTCAGAAACTCCCACAGCCGGACCTCCGGCACTGTAACCCTTTACCTg  >  1:136041/1‑62 (MQ=255)
caacaGAACCACAATTCAGAAACTCCCACAGCCGGACCTCCGGCACTGTAACCCTTTACCTg  >  1:516926/1‑62 (MQ=255)
caacaGAACCACAATTCAGAAACTCCCACAGCCGGACCTCCGGCACTGTAACCCTTTACCTg  >  1:897592/1‑62 (MQ=255)
caacaGAACCACAATTCAGAAACTCCCACAGCCGGACCTCCGGCACTGTAACCCTATACCTg  >  1:790364/1‑62 (MQ=255)
|                                                             
CAACAGAACCACAATTCAGAAACTCCCACAGCCGGACCTCCGGCACTGTAACCCTTTACCTG  >  W3110S.gb/2073554‑2073615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: