Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 2,583,888 A→T P98P (CCT→CCA aegA ← fused predicted FeS binding subunit and predicted NAD/FAD‑binding subunit of oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb2,583,8880AT84.6% 259.3 / 39.2 117P98P (CCT→CCAaegAfused predicted FeS binding subunit and predicted NAD/FAD‑binding subunit of oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (18/0);  new base T (99/0);  total (117/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.45e-01

Only 100 of 129 total aligned reads displayed.

CTTTTACTTTTCCTGCCGCGACGGGTGTCAGGACGATTTGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGC  >  W3110S.gb/2583836‑2583946
                                                    |                                                          
cttttacttttaCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:43414/1‑62 (MQ=255)
cttttacttttaCTACCGCAACCGGTGTAAGAACGCTTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1032604/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:442465/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:586439/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:576872/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:573135/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:537298/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:532429/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:531399/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:522429/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:508243/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:508124/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:502543/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:496058/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:666431/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:400862/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:400329/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:360803/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:355322/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:326807/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:314296/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:312402/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:284719/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:836065/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:969058/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:957974/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:94106/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:916027/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:894208/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:876024/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:875387/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:867455/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:857237/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:838193/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:660660/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:828691/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:809929/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:808538/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:805548/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:800517/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:797036/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:790845/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:715845/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:674290/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:360568/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1254798/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1401878/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1396185/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1388554/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1341204/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1309636/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1309144/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1296792/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1284921/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1255767/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:268697/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1212296/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1166420/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1147839/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1144065/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1130679/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1092165/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1053813/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1024287/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1444305/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:270475/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:255499/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:238572/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:230546/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:199888/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:182065/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:16451/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1414623/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1445963/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:1458094/1‑62 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGc                                                    >  1:693699/1‑61 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGc                                                    >  1:1080037/1‑61 (MQ=255)
cTTTTACTTTTCCTACCGCAACGGGTGTCAGAAAGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:919496/1‑62 (MQ=255)
cTTTCACTTTTCCTACCGCAACGGGTGTCAGAACGATTTGCATCGTACCAAATGGACAGGcc                                                   >  1:605768/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:816626/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:1026703/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:230879/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:13549/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:1254646/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:171005/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:762671/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:728174/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:45568/1‑62 (MQ=255)
                                    tttGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGa               >  1:4668/1‑62 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:492837/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:417292/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1176399/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:36935/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1156782/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1358761/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1011929/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1295045/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1061908/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1325200/62‑1 (MQ=255)
                                                 aaaaGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGc  <  1:1316038/62‑1 (MQ=255)
                                                    |                                                          
CTTTTACTTTTCCTGCCGCGACGGGTGTCAGGACGATTTGCATCGTACCAAAAGGACAGGCCACCACGCAGGATTTACAGCCAATACACTTTTGCTGATTGACCTGAATGC  >  W3110S.gb/2583836‑2583946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: